miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|24965036|gb|BJ546620.1|BJ546620 ACATAAACTCTACTTACAACATAACCCAATTTATTATNATATACTCCCTCCGTCCGAAATTACTTGTCGCCGAAATTAAT
TAAAATAGATGTATCCAGAACTAAAATACATCTAGATACATCCATTCCTTCGACAAGTATTTTCAGACAAAGGGAGTAGT
TACAGACATGCACAGTGATGAGGCACAGAAACTACAACAATAAAAAGTATGCCAAGACATTTATTCTTTATTTTTCTTAT
TGTTGTATCAGCCCAGGTAACAAACTGGGAACGTGATGTAATGTCCAATACACACTACAGATAACACTTCCCTTGGAGGT
CTTTTGAATACCACATATGGCAGTTGGTCGAGCAGTAGCTGTGCCAGGTTCCGATTATATGCAGCGCCTCACATGCGTGA
CCTCGTCGAAACTTGGTGAGCCGTCCGTGGCGCAGCCAGTGGTCGGCCGCTTTTCGCTCTTTCCTCCAAATACAATGATG
GTTTGAAGAAATCACCGTACATTTCAGCCCACTTGCTAAGCTTTGAATGTATATAAGATGCTCCCACCGTGTCAGCCCAA
AAGATGAGGCCACCCCTGTACTTGGGAAAGCCCATCCCAAGAACAGATGCAATATCCAGATCAGCAGCCCTGATCACCAC
ATTTTCATCCATGACCCTGCATGCTTCATTAACGACTGGGAAGAAAACCATCTCCAATATATCTTGATCCGATAAAGTAA
CCGGCT




Most similar to sp|Q8W1L6|MFP_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation
           multifunctional protein OS=Oryza sativa subsp. japonica
           GN=MFP PE=1 SV=2
          Length = 726

 Score =  193 bits (491), Expect = 9e-49
 Identities = 90/111 (81%), Positives = 100/111 (90%)
 Frame = -3

Query: 724 PVTLSDQDILEMVFFPVVNEACRVMDENVVIRAADLDIASVLGMGFPKYRGGLIFWADTV 545
           PVTLSDQDILEM+FFPVVNEACRVMDENVVIRA+DLDIAS+LGMGFPK+RGGL+FWADT+
Sbjct: 616 PVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFPKFRGGLVFWADTI 675

Query: 544 GASYIHSKLSKWAEMYGDFFKPSLYLEERAKSGRPLAAPRTAHQVSTRSRM 392
           GA YIHSKLSKW E+YGDFFKPS YLE+RAK   PL+AP    Q S+RSRM
Sbjct: 676 GAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASSRSRM 726